Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801587.1_cds_XP_016475992.1_6756
CDS Infomation

[gene=LOC107797604] [db_xref=GeneID:107797604] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016475992.1] [location=complement(join(41237..41572,41712..41808,42249..42343,42458..42679,42784..43101,43187..43471,43881..44240))] [gbkey=CDS]
Sequence

ATGGGGTGTGCTCAAGCAAAACCTTCAATGCATTCGCCCCCTCGGGGATTAGAGCAGTTG
AAGTTGGAGAGTGGATATGTTGCTAGAGATGATCAACATGTTAGACCAAGAAGGTCCACT
GGACAGAGGCCTCATGAGCAAAGAGAGAAGAATAATGCTAGGAGATTGAGTTATGATCAT
GCTTATAGAGATATTATCCATGAAAGGAATTTGGCGACGACTAGGAAAAGTACAAAGACA
GCAATTCATGAAGAAGAGTTAATAGATGGATGGCCAAAATGGTTGGTTGATAATATTCCA
AGAGAAGCTTTGGCTGGTTTAGTCCCAAAAAGTGCTGATTCTTATGACAAAATTGACAAG
GTAGGTTCAGGGACATATAGCAATGTGTATAGAGCGCGAGATAGGGATACAGGGAAGATT
GTTGCCTTAAAGAAAGTTCGTTTTGATACATCAGAACCGGAGAGTATAAAGTTCATGGCT
CGAGAGATTATGATCTTGCAGAAATTAGACCATCCTAATATCATAAAGCTTGAAGGACTG
GCTACCTCCAGAATGCAATATAGTCTTTATATAGTTTTCGAATACATGCAGTCTGATCTT
ACTAGCATAATATCTCGGCCTGATATGAGACTTAGTGAAGCACAGATAAAATGTTACATG
CAGCAGCTGCTTGAAGGGCTGCAGCATTGCCACGAGAGGGGTATTTTGCACCGAGACATT
AAAGGATCTAATTTGTTGATTGACAAAAATGGGATGCTAAAAATTGCAGATTTTGGACTT
GCAAACTACTTCAATCCTGAAAAAAAGCGTTCTCTTACTAGTCGAGTTGTCACACTTTGG
TACAGAGCTCCGGAACTACTACTAGGTGCTACAGATTATGGAATAGGTATCGATCTTTGG
AGTGCTGGCTGCCTCATGGCTGAAATGTTTGCAGGCAGACCTATTCTACCTGGTCGCACC
GAGGTGGAGCAGCTGCACAAGATATTCAAGCTTTGTGGTACACCTACTGAGGATTACTGG
AGGAAAACAAAACTTTCAACTACCTTCAGACCACCATATACCTATAGGTCAAATAAGAAG
GAAGCTTTCAGGCACTTTCCTGTATCTTCGTGGAGGCTTCTAAACGTTCTTCTTGCGTTA
GATCCTGCAAATCGTGGTTCTGCAAGTTCAGCTGTCCAAGATGAGTTCTTTCGTACGAGC
CCCTTGGCATGTGAACTCTCGGAGCTGCCTGTAGTGCATAAGGAGGATCCTGAGACAGTG
TTAGTGCTTGAGAGGAGAAGGCACAAGATTCAACAACGCTCTCAATCACAAAAGGAACGC
AAAAAGAAAATAATAGAAGCGGAAGAAACAAAACCAGATAATGCTGGCTCTTACAAGGAG
CCAAAAAAGAGTAGAGTTACAACGGTCTTTACCTTACTAGAGCCAGGAAGCACTACTACT
ACTACAACAAGCACATCCTCAAGCACTTCAAAGCCAACTGAGAAAGAAATCGAGACTCCA
CAGAGTTCTCCAAGAAGTACTGAATCTGATCCCAATGCCACTAGGAACATCAACAATAGA
CCTCCTTTGCCAAATGCTAGAAGAAGCAGAGCTAACAACAGCAAGAAGGATGCGATGAAC
AGATTGAGTCGCGTCCAAAGGTCTCAATCCACCAAAGATTTCCGAGATCTTGATCATAAA
AAATTCCATAAGCTTCGTGACGTTGTTGAATAA

Peptide Sequence

PEP ID

XP_016475992.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCAQAKPSMHSPPRGLEQLKLESGYVARDDQHVRPRRSTGQRPHEQREKNNARRLSYDH
AYRDIIHERNLATTRKSTKTAIHEEELIDGWPKWLVDNIPREALAGLVPKSADSYDKIDK
VGSGTYSNVYRARDRDTGKIVALKKVRFDTSEPESIKFMAREIMILQKLDHPNIIKLEGL
ATSRMQYSLYIVFEYMQSDLTSIISRPDMRLSEAQIKCYMQQLLEGLQHCHERGILHRDI
KGSNLLIDKNGMLKIADFGLANYFNPEKKRSLTSRVVTLWYRAPELLLGATDYGIGIDLW
SAGCLMAEMFAGRPILPGRTEVEQLHKIFKLCGTPTEDYWRKTKLSTTFRPPYTYRSNKK
EAFRHFPVSSWRLLNVLLALDPANRGSASSAVQDEFFRTSPLACELSELPVVHKEDPETV
LVLERRRHKIQQRSQSQKERKKKIIEAEETKPDNAGSYKEPKKSRVTTVFTLLEPGSTTT
TTTSTSSSTSKPTEKEIETPQSSPRSTESDPNATRNINNRPPLPNARRSRANNSKKDAMN
RLSRVQRSQSTKDFRDLDHKKFHKLRDVVE

Transcript Sequence

Gene sequence data has not been registered.